3rd Millennium, Inc.
   Our bioinformatics consulting, systems development, and integration services help ensure your bioinformatics systems are fully geared toward your success and unique strategies. We focus on deploying the best technologies for today while working on the be
   http://www.3rdmill.com

ALCARA BioSciences
   Microfluidics arrays ("lab-on-a-chip") for high-throughput pharmaceutical drug screening, multiplexed gene expression analysis, and multiplexed SNP genotyping.
   http://www.aclara.com/

ALMA Bioinformatics
   Develops tools for microarray data analysis and text-mining from scientific texts.
   http://www.almabioinfo.com

AMITA Databases
   Front-line and back-end bio-database development services for bioinformatics projects: design and maintenance of public sequence repositories, commercial data mining applications of molecular biology databases, automated data mirroring, database conversio
   http://www.amita.com/

Accelrys
   Supplier of bioinformatics software for gene and protein sequence analysis, high-throughput screening systems and databases for managing bioassay information. Formerly Oxford Molecular, Genetics Computer Group (GCG), Molecular Simulations Inc. (MSI), and
   http://www.accelrys.com/

AlgoNomics
   Provides online, as well as on-site, tools for protein sequence analysis and structure prediction. Focused on the relationship between the amino acid sequence of proteins and their function.
   http://www.algonomics.com

Applied Biosystems
   Offers instrument-based software for the discovery, development, and manufacturing of drugs.
   http://www.appliedbiosystems.com

Ariadne Genomics Inc.
   Software for biological pathways visualization and analysis, functional interpretation of genetic information.
   http://www.ariadnegenomics.com

Array Genetics, Inc.
   Provider of software solutions to meet the needs of researchers seeking to extract information from genome sequencing projects and DNA microarray screening. Free access to SeqIt, an on-line protein database mining program.
   http://www.arraygenetics.com/product_overview.php3

Automated Handling Systems, Inc.
   Java software development and consulting for the bioinformatics industry.
   http://www.autohandle.com

BioBase
   Biological databases, bioinformatics tools, and consulting in gene regulatory processes such as transcriptional control and signal transduction.
   http://www.biobase.de

BioCarta
   Web-based resource of information on gene function, proteomic pathways, and reagent exchange. Forum for information exchange and collaboration between researchers.
   http://www.biocarta.com/

BioDiscovery, Inc.
   Offers microarray bioinformatics software and services.
   http://www.biodiscovery.com

BioInfoExperts
   Develope and deliver training modules and courses in the field of bioinformatics for medical genetic analysis
   http://www.bioinfoexperts.com

BioInformatics Services
   Consulting firm specializing in applying computational biology to build solutions to biological and data analysis problems.
   http://www.bioinformaticsservices.com/

BioInformatics, Inc.
   Provides market research to clients in the biotechnology, medical, and pharmaceutical industry.
   http://www.gene2drug.com/

BioSoftSolutions
   Develops software analysis tools for mass spectrometry-based proteomics and microarray-based image processing.
   http://www.biosoftsolutions.de

BioTools Incorporated
   Provides software tools to accelerate the research process: GeneTool for DNA sequence analysis, PepTool for protein sequence analysis, and ChromaTool for DNA sequence assembly.
   http://www.biotools.com

Biodatabases
   Molecular database technologies. To-Oracle database conversions. Data-mining and eCommerce development for genomics and proteomics.
   http://www.biodatabases.com

Bioinformatics Solutions Inc.
   Professional algorithmic and software solutions for the bioinformatics industry: PROSPECT for protein structure prediction, PatternHunter for identifying all approximate repeats in a complete genome, and COPIA for discovering motifs in a family of protein
   http://www.bioinformaticssolutions.com

Biomax Informatics AG
   Offers annotated genome database, and DNA and protein sequence analysis tools.
   http://www.biomax.com

Biosentients Bioinformatics Software
   The Intelligent Molecular Object (IMO) Platform adds speed and efficiency to global data access and integrated analysis. Also: applications integration, automated new applications assembly, ISO9000/FDA/CDER/CFIR validation, distributed computing.
   http://www.io-informatics.com/forward.html

Biosift, Inc.
   Designs tools for comparative genomic data analysis, data integration, and visualization for genomic and protein data.
   http://biosift.com

Biosiris
   Bioinformatics company specialising in molecular modeling.
   http://www.biosiris.com/en/index.html

Bioxtal, proteomic services
   Provides crystallography services and recombinant protein production by means of Semliki Forest Virus.
   http://www.bioxtal.com/

BlueGnome
   Application of advanced statistical methods to the information bottlenecks in drug discovery.
   http://www.cambridgebluegnome.com

CELLECTIS : Rational Genome Engineering
   A company developing targeted gene replacement and modification technology.
   http://www.cellectis.com

CSIRO Bioinformatics
   Provides statistical consulting and specialised software development services to the biotechnology industry.
   http://www.bioinformatics.csiro.au

Caesar Software, LLC
   Offers iOligo software which designs oligonucleotides for PCR or sequencing reactions, and orders them directly from synthesis companies.
   http://www.caesarsoftware.com

Cambridge Antibody Technology
   Company developing human monoclonal antibodies as novel therapeutics. Also applying its technology platform to functional genomics to assist the discovery of new drug targets.
   http://www.cambridgeantibody.com

CeuticalSoft
   provides custom Excel programming services for drug discovery applications.
   http://www.ceuticalsoft.com

Clondiag Chip Technologies
   Develops software for the analysis and management of microarray data.
   http://www.clondiag.com/

Compugen
   Develops and markets platforms, tools and products that accelerate post-genomic research, the advanced study of proteins and protein pathways, and drug target discovery.
   http://cgen.com

CuraGen Corp.
   GeneScape Portal promoting CuraTools, an integrated suite of bioinformatics tools for easy analyses on collections of sequences.
   http://curatools.curagen.com

CytoGenomics
   Supplier of microarray analysis equipment designed for automated image analysis.
   http://www.cytogenomic.com/

DECODON - software tools for functional genomics
   makers of Delta2D, software for difference analysis of 2D electrophoresis gels.
   http://www.decodon.com/

DNA Software, Inc.
   Provides consulting on nucleic acid thermodynamics and OMP, the Oligonucleotide Modeling Platform, a software framework for building applications to design multiplex PCR primers, probes and DNA microarrays.
   http://www.dna-software.com

Discovery Partners International
   Discovery Partners International is the premier provider of technology, products and services that augment the drug discovery efforts of the pharmaceutical industry.
   http://www.discoverypartners.com

Essential Informatics
   Provides software consulting services to early-stage biotechnology ventures.
   http://www.essentialinformatics.com

Evolutionary BioInformatics
   Bioinformatics/genomics consultancy with expertise in comparative genomics and model organisms for target development and biological understanding.
   http://evobio.info

GenOdyssee SA
   Provides to the pharmaceutical, diagnostic and biotech industry full range of post-genomic services : HT SNP discovery and genotyping, and functional proteomics.
   http://www.genodyssee.com/

Genaissance Pharmaceuticals, Inc.
   Applies genomics and informatics technologies to improve drug development, pharmaceutical marketing and prescription medication.
   http://www.genaissance.com/

Genamics
   Supplier of DNA and protein sequence analysis software.
   http://genamics.com

Gene Biotechnologies
   Offering human, mouse and drosophila genome databases, a View&Search program and advanced products in development. Services include converting custom databases and adding special features.
   http://www.gene-biotech.com/

Gene-IT
   A bioinformatics company that provides life-science research organizations with scalable high performance software and scientific expertise for biological sequence data mining.
   http://www.gene-it.com

GeneData
   Provides customizable software solutions and related scientific services for the analysis of genomics and proteomics data.
   http://www.genedata.com

Genolyze
   Provides microarray and gene expression data analysis.
   http://www.genolyze.com

Genomatica, Inc.
   Innovator of in silico systems biology, building proprietary cellular-level models to accelerate the identification & production of more effective drugs, chemical & agricultural products, & enabling in-silico biological discovery.
   http://www.genomatica.com/

Genomatix Software
   Offers products and services in functional genomics of gene regulation.
   http://www.genomatix.com

Genomica Corporation
   BioPharmaceutical software for functional genomics, gene discovery, and positional cloning; using genetic analysis, physical mapping, and sequence analysis.
   http://www.genomica.com

Genomining
   Specializes in the data-mining, discovery, interpretation and management of biological data.
   http://www.genomining.com

Geospiza, Inc.
   Geospiza's bioinformatics software helps service, research, and clinical laboratories manage and analyze data from genomics, DNA sequencing, genotyping and proteomics.
   http://www.geospiza.com

Glycominds
   Company focusing on "more efficient and accurate bioinformatic analysis of complex carbohydrates and their interactions".
   http://www.glycominds.com

Health Discovery Corporation Home Page
   HDVY is a biotech company performing biomarker discovery in genomics and proteomics using advanced technologies such as support vector machines and fractal genomics modeling.
   http://www.healthdiscoverycorp.com/

INCOGEN, Inc.
   The Institute for Computational Genomics (INCOGEN) focuses on computational and data management solutions to the complex challenges faced by researchers in plant and animal genomics.
   http://www.incogen.com

Industry Support Programme
   Helping industry adapt quickly to, and maximise benefits from, developments in the fast-growing fields of bioinformatics, computational biology, and information technology in general - from the European Bioinformatics Inst.
   http://industry.ebi.ac.uk/

Informagen
   Produces DNA secondary structure prediction software including alignments and Chous-Fasman analysis.
   http://www.informagen.com/

Informatics
   Providing integrated information management solutions for the life sciences.
   http://www.appliedbiosystems.com/catalog/myab/StoreCatalog/products/ApplicationsHierarchy.jsp?hierarchyID=102&category1st=a83

Inpharmatica
   Developers of the Biopendium, a resource of protein structure and function information that enables identification of distantly related proteins and thus exploration of the human proteome.
   http://www.inpharmatica.com

Insilico Bioinformatics Company
   Insilico provides data centered bioinformatic tools for life science and pharma.
   http://www.insilico.com

Insilicos
   Provides proteomics, metabolomics, and systems biology software for mass spectrometry data.
   http://www.insilicos.com

Invenio Biosolutions
   Offers custom software development for gene and protein sequence analysis, and drug discovery.
   http://www.inveniobio.com

Iobion Informatics LLC
   Specializing in software for the analysis of microarray data (GeneTraffic).
   http://www.iobion.com

LION Bioscience AG
   Biological information technology company providing integrated solutions for genomics and bioinformatics to the life science industry.
   http://www.lionbioscience.com/

LabBook
   Provides XML-powered Internet solutions and bioinformatics applications for the life science researcher to access, data mine, integrate, store, and visualize biomedical information.
   http://www.labbook.com

LabDB.com
   Do fast track experiments online for gene analysis, homology analysis for fingerprinting, agarose gel image comparison applications
   http://www.labdb.com

LabVantage Solutions
   LabVantage Solutions is a global provider of workflow driven automation tools, knowledge management software, implementation services, and consulting to leading discovery-oriented, high throughput screening, genomics, proteomics, pharmaceuticals, and comb
   http://www.labvantage.com

LifeSpan BioSciences
   Provides gene expression and protein localization database aimed at drug-discovery programs. Also offers target validation by selection and prioritization.
   http://www.lsbio.com/

MDL Information Systems
   Discovery informatics company for life sciences and chemistry. Makers of Assay Explorer software to track and datamine imaging based experiments.
   http://www.mdli.com

MathSoft Inc.
   (now Insightful) is developer of S-PLUS, excellent statistical data mining software. Insightful provides many other data analysis tools.
   http://www.insightful.com/products/splus/

Mathematical Ecology
   Consulting by mathematical models for biological and ecological problems.
   http://www.mathecology.com

Matrix Science
   Mascot, the on-line search engine for protein identification using mass spectrometry data
   http://www.matrixscience.com/

MediCel Ltd.
   Software and services for reverse engineering and modeling of biochemical pathways for drug target discovery and validation projects related to inflammatory diseases.
   http://www.medicel.com/

MetaHelix Life Sciences
   Metahelix Life Sciences is a company that specializes in scientific consulting, contract research, application software and product development in the emerging areas of life science informatics and genomics.
   http://www.meta-helix.com

Metabolic Explorer
   Explores and designs metabolic pathways.
   http://www.metabolic-explorer.com/

Metalife AG
   Developing bioinformatics software for sequence analysis, sequence based predictions, and biological pathway analysis and visualization.
   http://metalife.orbitel.bg

MiraiBio Inc
   Hitachi Genetic Systems, by MiraiBio Inc, offers quality instruments, software, consumables and supporting applications for the genetics/molecular biology laboratory.
   http://www.miraibio.com/

Molecular Mining Corporation
   Genomics, proteomics, combinatorial chemistry, computational science and machine learning for drug discovery.
   http://www.molecularmining.com/

Myriad Biotechnology Tool: ProNet
   Myriad's ProNet program is designed to rapidly identify large numbers of novel protein-protein interactions.
   http://www.myriad.com/research/pronet.htm

Nonlinear Dynamics
   Develops scientific software for proteomics, genomics, drug discovery and bioinformatics. Products include Phoretix, Progenesis and Progenera.
   http://www.nonlinear.com/

Ocimum Biosolutions
   Contract R&D services in bioinformatics, LIMS, genomics, and proteomics for the biotech and pharma industries.
   http://www.ocimumbio.com

OmniViz Inc.
   Supplier of Clustering and Data Visualization software to the Life and Chemical Sciences industries.
   http://www.omniviz.com

Oxford GlycoSciences (OGS)
   Provides proteomics-based drug discovery and development and identification of proteins directly associated with diseases.
   http://www.ogs.com

Predictive Patterns Software
   Provides software for visualization, analysis and classification of gene expression and proteomics data.
   http://www.predictivepatterns.com

ProCeryon Biosciences GmbH
   Provides protein sequence and structure based bioinformatics tools for the pharmaceutical and biotech industries.
   http://www.proceryon.com

Prokaria
   A biotechnology company that is combining ecology and bioinformatics to directly discover novel genes in nature. Currently focussing on thermophiles.
   http://prokaria.is

Protein Pathways, Inc.
   Uses protein interactions to aid in the therapeutic drug development.
   http://www.proteinpathways.com

Proteomes
   Human animal proteome research, consulting and database. Searching for the proteome of birth, growth, aging and disease using proteomics tools, 2D and mass spectrometry. Bilingual but some English pages include Korean text.
   http://www.proteomes.co.kr/

Quantiom
   Products and services for bioanalytical data analysis.
   http://www.quantiom.de/quantiom/

Relevant Software Inc.
   Project development services for life science software projects.
   http://www.relevantsoftware.com

Rosetta Inpharmatics
   Informational genomics - the integration of bioinformatics with genomics tools to accelerate and improve the drug discovery process. Providing an economical, reliable, and flexible technology for pharmaceutical, biotechnology and agricultural companies.
   http://www.rii.com

Rosetta Inpharmatics, Inc
   Provides software solutions designed to accelerate life science research using advanced genomic data analysis technology.
   http://www.rosettabio.com/

SBI Science LLC
   Consulting in gene product analysis, including structure-based sequence alignment, homology modeling, and x-ray crystallography.
   http://sbiscience.com

Seascape Learning
   Distributes structural bioinformatics software and educational material.
   http://www.seascapelearning.com/

Sequence Bioinformatics
   Canadian company providing binformatics and knowledge management solutions for life science researchers.
   http://www.seqbio.com

Silicon Genetics
   Bioinformatics tools for visualization and analysis of gene expression data, allowing scientists to extract knowledge for drug discovery and gene function identification.
   http://www.sigenetics.com

Strand Genomics
   Develops softwares (avadis, acuris) for analysis of gene expression, and proteomics data for drug discovery and development.
   http://www.strandgenomics.com

Structural Bioinformatics, Inc.
   Expediting lead discovery by providing structural data and analysis for drug targets.
   http://www.cengent.com/

Syngene
   Provides bio imaging systems, gel documentation systems and gel analysis software for UV, white light, chemiluminescence, fluorescence applications.
   http://www.syngene.com/default.asp

TIB MOLBIOL
   DNA primer and probe synthesis and diagnostic PCR assay design.
   http://www.tib-molbiol.com/

Tahoe Informatics
   Consulting group specializing in training, marketing, and testing.
   http://www.bioinformaticist.biz/

TimeLogic Corporation
   With our DeCypher Bioinformatics Accelerator, TimeLogic speeds genomic discovery for biotechnology and pharmaceutical companies. DeCypher dramatically accelerates computationally intensive algorithms, including BLAST, Smith-Waterman and HMM analysis.
   http://www.timelogic.com

Tripos, Inc.
   Provider of discovery research software & services to pharmaceutical, biotechnology, & other life sciences companies worldwide.
   http://www.tripos.com/

United Bioinformatica Inc. (UBI)
   Provides bioinformatics software in Canada for laboratory information management systems (lims), sequence analysis, microarray expression analysis, and proteomics (1d and 2d gel image analysis).
   http://www.ubi.ca/bioinformatics-software.html

VizXlabs
   Develops software systems for the acquisition, management and analysis of molecular biology data and information.
   http://vizxlabs.com/

e-Proteomics.net
   Offers microarray products to further dermatology research. Webpage has information on techniques used to analyze proteins.
   http://www.e-proteomics.net/

ePitope Informatics
   Specializes in epitope prediction and protein analysis for proteomics, diagnostics, therapeutics, life science research, and antibody production.
   http://www.epitope-informatics.com

geneticXchange
   geneticXchange provides the only open system Data Integration Platform to help accelerate the drug discovery process for biotech and pharmaceutical companies.
   http://www.geneticXchange.com/