ADE-4 
Exploratory and Euclidean methods in Environmental sciences.
http://pbil.univ-lyon1.fr/ADE-4/
Biota 
Microbial Ecology Resources' software; this particular item will run simulations of multiple species in a specific environment. Most variables can be manipulated.
http://commtechlab.msu.edu/sites/dlc-me/resources/rs_4.html
Biovol 
Program for calculating the volumes, surface areas, and surface to volume ratios of diatoms.
http://www.msu.edu/~kirschte/biovol
CyberTracker 
Free software for data collection and analysis in ecological and environmental field work.
http://www.cybertracker.org/
Didg Information Systems 
Mobile, desktop and internet information systems for recording, identifying and brokering plant and animal observations.
http://didg.com
Diversidad 
Scans digital earth images and automatically identifies areas with both high and low biodiversity.
http://home.att.net/~podolsky/divcov.htm
ECOSIM : Ecosystem Simulation 
Information and links concerning ecological modeling and application of simulation to ecology.
http://www.isima.fr/ecosim/
EcoBeaker - Ecology teaching software 
Simulation software for teaching ecology, conservation biology, and evolution. Also makes individual-based research models.
http://www.ecobeaker.com
Ecological Software Solutions 
Software for biology, ecology, geography, wildlife fisheries and the environmental sciences.
http://www.ecostats.com
Ecology Educational Software 
Free educational software for college-level ecology courses plus links to many additional software sites.
http://www.iup.edu/~rgendron/software.htmlx
Environmental Design Making 
Microbial Ecology Resources' software designed for students. Allows students to create ecosystems to gain understandings of ecosystem functionality and productivity.
http://commtechlab.msu.edu/sites/dlc-me/resources/rs_5.html
Forager 
PC software for feeding behavior simulation, calculation, and tabular and graphical presentation for publication.
http://www.amberwaves.com/forager/
Fossil Creek Software 
Describes and offers POP-II and POP-III population dynamics software, which is used by government and university wildlife biologists to simulate the dynamics of deer, elk, moose and other large animal populations.
http://weba.viawest.net/%7Efcs/p2/index.html
Gecko 
Yale software; downloadable demo available for this software. Designed to teach ecosystem dynamics to advanced ecology students.
http://www.cbc.yale.edu/old/cce/gecko.html
Jensen Software Systems 
MultiTrace analyzes data origined from various data-loggers (e.g. TDR).
http://www.jensen-software.com/
KiteGraph 
KiteGraph illustrates growth patterns of animal populations in kite diagrams.
http://home.swipnet.se/kitegraph/
KrebsWin 
Programs from Ecological Methodology by Charles J. Krebs, compiled to run under Windows 3.x and Windows 9x.
http://www.biology.ualberta.ca/jbrzusto/krebswin.html
LemnaTec Image Processing 
Bio-testing for potentially hazardous substances using image processing of cultured Lemna.
http://www.lemnatec.de
MjM Software Design 
PC-ORD software for multivariate statistical analysis of ecological communities, including cluster analysis, ordination, and species diversity.
http://home.centurytel.net/~mjm/
Oakleaf Systems 
Simulations of data based upon relationships presented in the journal Ecology, with 25 different simulations for each journal volume.
http://www.oakleafsystems.net/
Patuxent Software Archive 
Site contains software for ecological management, including tagging game and ecosystem analysis.
http://www.mbr-pwrc.usgs.gov/software.html
Pisces Conservation Ltd 
Information about ecological software and consultancy services.
http://www.pisces-conservation.com/
Population Ecology 
Online quantitative population ecology lectures and population model and data information.
http://www.ento.vt.edu/~sharov/
Populus - Simulations of Population Biology 
Software containing set of simulations used to teach population biology and evolutionary ecology at the University of Minnesota. Freely downloadable for educational use.
http://www.cbs.umn.edu/populus
Program Distance 
Distance is a software program designed for the analysis of distance sampling data, to estimate density and abundance of a population.
http://www.ruwpa.st-and.ac.uk/distance/
RAMAS Ecological and Environmental Software 
Offers software for ecology, conservation biology, wildlife management, and human health risk analysis. Data analysis for endangered and threatened species, models of extinction risk assessment linked to geographic information systems.
http://www.ramas.com
RHABSIM 
RHABSIM (Riverine HABitat SIMuation) is a fully integrated program for river hydraulics and aquatic habitat modeling using the Instream Flow Incremental Methodology (IFIM). Running in Microsoft Windows and DOS, it is an extensive conversion of the PHABSIM
http://www.northcoast.com/~trpa/index.html
Simfor 
A decision support tool designed to help managers and researchers evaluate the impacts of forest harvesting scenarios against landscape and habitat indicators.
http://www.forestry.ubc.ca/simfor/
The Swarm Simulation System 
The Swarm Simulation System, created by The Sante Fe Institute, can be used both as a simulation tool for artificial life and ecological models and ecosystems.
http://www.santafe.edu/projects/swarm/
VORTEX PVA Software 
Population Viability Analysis Software, for use in research, management, and conservation planning.
http://pw1.netcom.com/~rlacy/vortex.html
WWW-Server for Ecological Modelling 
Information about ecological modelling (simulation models, descriptions of these models, simulation-software, data sources and other information about modelling). Many ecological models available for downloading; researchers are invited to upload their m
http://dino.wiz.uni-kassel.de/ecobas.html
Wa-Tor for Windows 
Site offers a population ecology simulation game pitting sharks against fish. The populations may fluctuate or may go extinct, depending on the initial parameters and subsequent random events.
http://www.kovcomp.co.uk/wator/
Wildlife Counts 
Software to help estimate populations of birds and fish in an ecosystem.
http://www.wildlifecounts.com/
Wildlife Ecology Software 
A clearing-house for wildlife ecology related software, for applications such as habitat analysis, diversity indices, simulations, general population dynamics, capture/recapture, survival, energetics, statistics, home range, and telemetry.
http://nhsbig.inhs.uiuc.edu/
WorldMap 
Software for exploring geographical patterns in diversity, rarity and conservation priorities from large biological datasets.
http://www.nhm.ac.uk/science/projects/worldmap/worldmap/demo2.htm
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